Erich J. Baker

Publication Activity (10 Years)

Years Active: 2004-2023
Publications (10 Years): 10

Top Topics

Bipartite Graph

Character N Grams

Top Venues

IEEE Trans. Netw. Serv. Manag.

Publications

Alibek Zhakubayev, Thomas Andersen, Annie Vesterby, Lene Warner Thorup Boel, Kathleen A. Grant, Urszula Iwaniec, Russell Turner, Erich J. Baker, Mary Lauren Benton
Image processing approach provides robust feature extraction for classification with small sample sizes. ICISDM (2023)
Jun Huang, Qiang Duan, Cong-Cong Xing, Bo Gu, Guodong Wang, Sherali Zeadally, Erich J. Baker
A Fine-Grained Video Traffic Control Mechanism in Software-Defined Networks. IEEE Trans. Netw. Serv. Manag. 19 (3) (2022)
Jason A. Bubier, David P. Hill, Gaurab Mukherjee, Timothy Reynolds, Erich J. Baker, Alexander Berger, Jake Emerson, Judith A. Blake, Elissa J. Chesler
Curating gene sets: challenges and opportunities for integrative analysis. Database J. Biol. Databases Curation 2019 (2019)
Sharon Moore, Ami Radunskaya, Elizabeth Zollinger, Kathleen A. Grant, Steven Gonzales, Erich J. Baker
Time for a Drink? A Mathematical Model of Non-human Primate Alcohol Consumption. Frontiers Appl. Math. Stat. 5 (2019)
Charles A. Phillips, Kai Wang, Erich J. Baker, Jason A. Bubier, Elissa J. Chesler, Michael A. Langston
-Partite Graphs. Algorithms 12 (1) (2019)
S. M. Ashiqul Islam, Benjamin J. Heil, Christopher Michel Kearney, Erich J. Baker
Protein classification using modified n-grams and skip-grams. Bioinform. 34 (9) (2018)
S. M. Ashiqul Islam, Christopher Michel Kearney, Erich J. Baker
CSPred: A machine-learning-based compound model to identify the functional activities of biologically-stable toxins. BIBM (2017)
Qi Yang, Greg Speegle, Erich J. Baker
On using cached results to enumerate maximal k-cliques in GeneWeaver. ICNC-FSKD (2017)
S. M. Ashiqul Islam, Christopher Michel Kearney, Ankan Choudhury, Erich J. Baker
Models: Extended Abstract. BCB (2017)
Erich J. Baker, Jason A. Bubier, Timothy Reynolds, Michael A. Langston, Elissa J. Chesler
GeneWeaver: data driven alignment of cross-species genomics in biology and disease. Nucleic Acids Res. 44 (Database-Issue) (2016)
Charles A. Phillips, Kai Wang, Jason A. Bubier, Erich J. Baker, Elissa J. Chesler, Michael A. Langston
Scalable multipartite subgraph enumeration for integrative analysis of heterogeneous experimental functional genomics data. BCB (2015)
S. M. Ashiqul Islam, Tanvir Sajed, Christopher Kearney, Erich J. Baker
PredSTP: a highly accurate SVM based model to predict sequential cystine stabilized peptides. BMC Bioinform. 16 (2015)
Charles A. Phillips, Erich J. Baker, Elissa J. Chesler, Michael A. Langston
Algorithmic tools for tripartite data analysis. BMC Bioinform. 15 (S-10) (2014)
Yun Zhang, Charles A. Phillips, Gary L. Rogers, Erich J. Baker, Elissa J. Chesler, Michael A. Langston
On finding bicliques in bipartite graphs: a novel algorithm and its application to the integration of diverse biological data types. BMC Bioinform. 15 (2014)
Jeremy J. Jay, Erich J. Baker, Elissa J. Chesler
A Context-Driven Gene Prioritization Method for Web-Based Functional Genomics. ISBRA (2013)
Erich J. Baker, Jeremy J. Jay, Jason A. Bubier, Michael A. Langston, Elissa J. Chesler
GeneWeaver: a web-based system for integrative functional genomics. Nucleic Acids Res. 40 (Database-Issue) (2012)
Charles A. Phillips, Jeremy J. Jay, Erich J. Baker, Elissa J. Chesler, Michael A. Langston
On Bipartite Graph Decomposition in the Presence of Noise, with Applications to Biological Data Clustering. CTW (2012)
Erich J. Baker, Guan N. Lin, Huadong Liu, Ravi Kosuri
NFU-Enabled FASTA: moving bioinformatics applications onto wide area networks. Source Code Biol. Medicine 2 (2007)
Erich J. Baker, Leslie Galloway, Barbara Jackson, Denise Schmoyer, Jay Snoddy
MuTrack: a genome analysis system for large-scale mutagenesis in the mouse. BMC Bioinform. 5 (2004)