Diego Díaz-Domínguez

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 18

Top Topics

Compressed Text

Space Efficient

Nearest Neighbor Graph

Top Venues

Publications

Diego Díaz-Domínguez, Miika Leinonen, Leena Salmela
Space-efficient computation of k-mer dictionaries for large values of k. Algorithms Mol. Biol. 19 (1) (2024)
Diego Díaz-Domínguez, Gonzalo Navarro
Efficient construction of the BWT for repetitive text using string compression. Inf. Comput. 294 (2023)
Diego Díaz-Domínguez, Leena Salmela
Computing All-vs-All MEMs in Grammar-Compressed Text. SPIRE (2023)
Diego Díaz-Domínguez, Leena Salmela
Computing all-vs-all MEMs in grammar-compressed text. CoRR (2023)
Diego Díaz-Domínguez, Saska Dönges, Simon J. Puglisi, Leena Salmela
Simple Runs-Bounded FM-Index Designs Are Fast. SEA (2023)
Diego Díaz-Domínguez, Gonzalo Navarro
Efficient Construction of the BWT for Repetitive Text Using String Compression. CPM (2022)
Diego Díaz-Domínguez, Simon J. Puglisi, Leena Salmela
Computing all-vs-all MEMs in run-length encoded collections of HiFi reads. CoRR (2022)
Diego Díaz-Domínguez, Gonzalo Navarro
Efficient Construction of the BWT for Repetitive Text Using String Compression. CoRR (2022)
Diego Díaz-Domínguez, Simon J. Puglisi, Leena Salmela
Computing All-vs-All MEMs in Run-Length-Encoded Collections of HiFi Reads. SPIRE (2022)
Diego Díaz-Domínguez, Gonzalo Navarro
Efficient construction of the extended BWT from grammar-compressed DNA sequencing reads. CoRR (2021)
Diego Díaz-Domínguez, Gonzalo Navarro, Alejandro Pacheco
An LMS-Based Grammar Self-index with Local Consistency Properties. SPIRE (2021)
Diego Díaz-Domínguez, Gonzalo Navarro
A grammar compressor for collections of reads with applications to the construction of the BWT. DCC (2021)
Diego Díaz-Domínguez, Gonzalo Navarro
A grammar compressor for collections of reads with applications to the construction of the BWT. CoRR (2020)
Diego Díaz-Domínguez, Travis Gagie, Gonzalo Navarro
Simulating the DNA String Graph in Succinct Space. CoRR (2019)
Diego Díaz-Domínguez
An Index for Sequencing Reads Based on the Colored de Bruijn Graph. SPIRE (2019)
Diego Díaz-Domínguez
An Index for Sequencing Reads Based on The Colored de Bruijn Graph. CoRR (2019)
Diego Díaz-Domínguez, Travis Gagie, Gonzalo Navarro
Simulating the DNA Overlap Graph in Succinct Space. CPM (2019)
Diego Díaz-Domínguez, Djamal Belazzougui, Travis Gagie, Veli Mäkinen, Gonzalo Navarro, Simon J. Puglisi
Assembling Omnitigs using Hidden-Order de Bruijn Graphs. CoRR (2018)