Charles M. Perou

Publication Activity (10 Years)

Years Active: 2004-2021
Publications (10 Years): 9

Top Topics

Drosophila Melanogaster

Gene Expression Profiling

Multiple Instance

Top Venues

Publications

Meichen Dong, Aatish Thennavan, Eugene Urrutia, Yun Li, Charles M. Perou, Fei Zou, Yuchao Jiang
SCDC: bulk gene expression deconvolution by multiple single-cell RNA sequencing references. Briefings Bioinform. 22 (1) (2021)
Arran K. Turnbull, Cigdem Selli, Carlos Martinez-Perez, Anu Fernando, Lorna Renshaw, Jane Keys, Jonine Figueroa, Xiaping He, Maki Tanioka, Alison F. Munro, Lee Murphy, Angie Fawkes, Richard Clark, Audrey Coutts, Charles M. Perou, Lisa A. Carey, Michael J. Dixon, Andrew H. Sims
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: comparison of gene expression profiling approaches. BMC Bioinform. 21 (1) (2020)
Heather D. Couture, Roland Kwitt, J. S. Marron, Melissa A. Troester, Charles M. Perou, Marc Niethammer
Deep Multi-View Learning via Task-Optimal CCA. CoRR (2019)
Lisle E. Mose, Charles M. Perou, Joel S. Parker
Improved indel detection in DNA and RNA via realignment with ABRA2. Bioinform. 35 (17) (2019)
Heather D. Couture, J. S. Marron, Charles M. Perou, Melissa A. Troester, Marc Niethammer
Multiple Instance Learning for Heterogeneous Images: Training a CNN for Histopathology. MICCAI (2) (2018)
Daniel J. Luckett, Eric B. Laber, Samer S. El-Kamary, Cheng Fan, Ravi Jhaveri, Charles M. Perou, Fatma M. Shebl, Michael R. Kosorok
Receiver Operating Characteristic Curves and Confidence Bands for Support Vector Machines. CoRR (2018)
Heather D. Couture, J. S. Marron, Charles M. Perou, Melissa A. Troester, Marc Niethammer
Multiple Instance Learning for Heterogeneous Images: Training a CNN for Histopathology. CoRR (2018)
Lisle E. Mose, Sara R. Selitsky, Lisa M. Bixby, David L. Marron, Michael D. Iglesia, Jonathan S. Serody, Charles M. Perou, Benjamin Vincent, Joel S. Parker
Assembly-based inference of B-cell receptor repertoires from short read RNA sequencing data with V'DJer. Bioinform. 32 (24) (2016)
Heather D. Couture, J. S. Marron, Nancy E. Thomas, Charles M. Perou, Marc Niethammer
Hierarchical task-driven feature learning for tumor histology. ISBI (2015)
Lisle E. Mose, Matthew D. Wilkerson, D. Neil Hayes, Charles M. Perou, Joel S. Parker
ABRA: improved coding indel detection via assembly-based realignment. Bioinform. 30 (19) (2014)
Nikhil Singh, Heather D. Couture, J. S. Marron, Charles M. Perou, Marc Niethammer
Topological Descriptors of Histology Images. MLMI (2014)
Christopher R. Cabanski, Keary Cavin, Chris Bizon, Matthew D. Wilkerson, Joel S. Parker, Kirk C. Wilhelmsen, Charles M. Perou, J. S. Marron, D. Neil Hayes
ReQON: a Bioconductor package for recalibrating quality scores from next-generation sequencing data. BMC Bioinform. 13 (2012)
Andrey A. Shabalin, Håkon Tjelmeland, Cheng Fan, Charles M. Perou, Andrew B. Nobel
Merging two gene-expression studies via cross-platform normalization. Bioinform. 24 (9) (2008)
Mark F. Burkart, Jonathan D. Wren, Jason I. Herschkowitz, Charles M. Perou, Harold R. Garner
Clustering microarray-derived gene lists through implicit literature relationships. Bioinform. 23 (15) (2007)
Mónica Benito, Joel S. Parker, Quan Du, Junyuan Wu, Dong Xiang, Charles M. Perou, James Stephen Marron
Adjustment of systematic microarray data biases. Bioinform. 20 (1) (2004)