Carlo Piermarocchi

Publication Activity (10 Years)

Years Active: 2014-2021
Publications (10 Years): 6

Top Topics

Hopfield Networks

Topological Properties

Gene Regulatory

Gene Expression

Top Venues

PLoS Comput. Biol.

J. Comput. Biol.

Publications

Connor Glosser, Elliot Lu, T. J. Bertus, Carlo Piermarocchi, Balasubramaniam Shanker
Acceleration techniques for semiclassical Maxwell-Bloch systems: An application to discrete quantum dot ensembles. Comput. Phys. Commun. 258 (2021)
Sergii Domanskyi, Carlo Piermarocchi, George Mias
PyIOmica: longitudinal omics analysis and trend identification. Bioinform. 36 (7) (2020)
Sergii Domanskyi, Alex Hakansson, Giovanni Paternostro, Carlo Piermarocchi
Modeling disease progression in Multiple Myeloma with Hopfield networks and single-cell RNA-seq. BIBM (2019)
Sergii Domanskyi, Anthony Szedlak, Nathaniel T Hawkins, Jiayin Wang, Giovanni Paternostro, Carlo Piermarocchi
Polled Digital Cell Sorter (p-DCS): Automatic identification of hematological cell types from single cell RNA-sequencing clusters. BMC Bioinform. 20 (1) (2019)
Anthony Szedlak, Spencer Sims, Nicholas Smith, Giovanni Paternostro, Carlo Piermarocchi
Cell cycle time series gene expression data encoded as cyclic attractors in Hopfield systems. PLoS Comput. Biol. 13 (11) (2017)
Anthony Szedlak, Nicholas Smith, Li Liu, Giovanni Paternostro, Carlo Piermarocchi
Evolutionary and Topological Properties of Genes and Community Structures in Human Gene Regulatory Networks. PLoS Comput. Biol. 12 (6) (2016)
Edison Ong, Anthony Szedlak, Yunyi Kang, Peyton Smith, Nicholas Smith, Madison McBride, Darren Finlay, Kristiina Vuori, James Mason, Edward D. Ball, Carlo Piermarocchi, Giovanni Paternostro
A Scalable Method for Molecular Network Reconstruction Identifies Properties of Targets and Mutations in Acute Myeloid Leukemia. J. Comput. Biol. 22 (4) (2015)
Trish P. Tran, Edison Ong, Andrew P. Hodges, Giovanni Paternostro, Carlo Piermarocchi
Prediction of kinase inhibitor response using activity profiling, in vitro screening, and elastic net regression. BMC Syst. Biol. 8 (2014)