Aysegul Ozkan

Publication Activity (10 Years)

Years Active: 2011-2020
Publications (10 Years): 4

Top Topics

Configuration Space

Iterative Closest Point Algorithm

Human Immunodeficiency Virus

Top Venues

J. Chem. Inf. Model.

ACM Trans. Math. Softw.

Publications

Rahul Prabhu, Meera Sitharam, Aysegul Ozkan, Ruijin Wu
Atlasing of Assembly Landscapes using Distance Geometry and Graph Rigidity. J. Chem. Inf. Model. 60 (10) (2020)
Ruijin Wu, Rahul Prabhu, Aysegul Ozkan, Meera Sitharam
Rapid prediction of crucial hotspot interactions for icosahedral viral capsid self-assembly by energy landscape atlasing validated by mutagenesis. PLoS Comput. Biol. 16 (10) (2020)
Aysegul Ozkan, Rahul Prabhu, Troy Baker, James Pence, Jörg Peters, Meera Sitharam
AlgorithmXXX: Efficient Atlasing and Search of Configuration Spaces of Point-Sets Constrained by Distance Intervals. CoRR (2018)
Aysegul Ozkan, Rahul Prabhu, Troy Baker, James Pence, Jörg Peters, Meera Sitharam
Algorithm 990: Efficient Atlasing and Search of Configuration Spaces of Point-Sets Constrained by Distance Intervals. ACM Trans. Math. Softw. 44 (4) (2018)
Ruijin Wu, Aysegul Ozkan, Antonette Bennett, Mavis Agbandje-McKenna, Meera Sitharam
Robustness measure for an adeno-associated viral shell self-assembly is accurately predicted by configuration space atlasing using EASAL. BCB (2012)
Rahul Prabhu, Meera Sitharam, Aysegul Ozkan, Ruijin Wu
Atlasing of Assembly Landscapes using Distance Geometry and Graph Rigidity CoRR (2012)
Aysegul Ozkan, Meera Sitharam
EASAL (Efficient Atlasing, Analysis and Search of Molecular Assembly Landscapes). BICoB (2011)