Ayah Zirikly

Publication Activity (10 Years)

Years Active: 2013-2023
Publications (10 Years): 32

Top Topics

Medical Records

Named Entity Recognition

Sequence Labeling

Top Venues

CLPsych@NAACL-HTL

Publications

Keith Harrigian, Ayah Zirikly, Brant Chee, Alya Ahmad, Anne Links, Somnath Saha, Mary Catherine Beach, Mark Dredze
Characterization of Stigmatizing Language in Medical Records. ACL (2) (2023)
Denis R. Newman-Griffis, Bart Desmet, Ayah Zirikly, Suzanne Tamang, Chih-Hung Chang
Editorial: Artificial intelligence for human function and disability. Frontiers Digit. Health 5 (2023)
Gerardo Flores, George H. Chen, Tom J. Pollard, Ayah Zirikly, Michael C. Hughes, Tasmie Sarker, Joyce C. Ho, Tristan Naumann
Conference on Health, Inference, and Learning (CHIL) 2022. CHIL (2022)
Geoffrey M. Gray, Luis M. Ahumada, Ayah Zirikly, Masoud Rouhizadeh, Thomas Richards, Elham Hatef
Application of Natural Language Processing to Identify Social Needs from The Electronic Health Record's Free-Text Notes. AMIA (2022)
Ayah Zirikly, Bart Desmet, Julia Porcino, Jonathan Camacho Maldonado, Pei-Shu Ho, Rafael Jiménez Silva, Maryanne Sacco
A Whole-Person Function Dictionary for the Mobility, Self-Care and Domestic Life Domains: a Seedset Expansion Approach. LREC (2022)
Thong Nguyen, Andrew Yates, Ayah Zirikly, Bart Desmet, Arman Cohan
Improving the Generalizability of Depression Detection by Leveraging Clinical Questionnaires. ACL (1) (2022)
Thong Nguyen, Andrew Yates, Ayah Zirikly, Bart Desmet, Arman Cohan
Improving the Generalizability of Depression Detection by Leveraging Clinical Questionnaires. CoRR (2022)
Subhrajit Roy, Stephen Pfohl, Girmaw Abebe Tadesse, Luis Oala, Fabian Falck, Yuyin Zhou, Liyue Shen, Ghada Zamzmi, Purity Mugambi, Ayah Zirikly, Matthew B. A. McDermott, Emily Alsentzer
Machine Learning for Health (ML4H) 2021. ML4H@NeurIPS (2021)
Thanh Thieu, Jonathan Camacho Maldonado, Pei-Shu Ho, Min Ding, Alex Marr, Diane Brandt, Denis Newman-Griffis, Ayah Zirikly, Leighton Chan, Elizabeth Rasch
A comprehensive study of mobility functioning information in clinical notes: Entity hierarchy, corpus annotation, and sequence labeling. Int. J. Medical Informatics 147 (2021)
Denis Newman-Griffis, Guy Divita, Bart Desmet, Ayah Zirikly, Carolyn Penstein Rosé, Eric Fosler-Lussier
Ambiguity in medical concept normalization: An analysis of types and coverage in electronic health record datasets. J. Am. Medical Informatics Assoc. 28 (3) (2021)
Joshua C. Chang, Patrick Fletcher, Jungmin Han, Ted L. Chang, Shashaank Vattikuti, Bart Desmet, Ayah Zirikly, Carson C. Chow
Sparse encoding for more-interpretable feature-selecting representations in probabilistic matrix factorization. ICLR (2021)
Joshua C. Chang, Patrick Fletcher, Jungmin Han, Ted L. Chang, Shashaank Vattikuti, Bart Desmet, Ayah Zirikly, Carson C. Chow
Sparse encoding for more-interpretable feature-selecting representations in probabilistic matrix factorization. CoRR (2020)
Rafael Jiménez Silva, Chunxiao Zhou, Bart Desmet, Ayah Zirikly, Alex Marr, Maryanne Sacco, Pei-Shu Ho, Jonathan Camacho Maldonado, Julia Porcino, Guy Divita, Elizabeth Rasch
Curating Annotated Corpora for Functioning Information. AMIA (2020)
Jonathan Camacho Maldonado, Pei-Shu Ho, Rafael Jiménez Silva, Alex Marr, Julia Porcino, Maryanne Sacco, Ayah Zirikly, Leighton Chan, Elizabeth Rasch
Experiences and Challenges in Manual Annotation of Functioning Information in Medical Records. AMIA (2020)
Denis R. Newman-Griffis, Guy Divita, Bart Desmet, Ayah Zirikly, Carolyn Penstein Rosé, Eric Fosler-Lussier
Ambiguity in Medical Concept Normalization: An Analysis of Types and Coverage in Electronic Health Record Datasets. AMIA (2020)
Guy Divita, Bart Desmet, Ayah Zirikly, Luke Breitfeller, Carolyn Penstein Rosé
Angelfish: Building a Structurally Diverse Clinical Document Corpus. AMIA (2020)
Bart Desmet, Julia Porcino, Ayah Zirikly, Denis Newman-Griffis, Guy Divita, Elizabeth Rasch
Development of Natural Language Processing Tools to Support Determination of Federal Disability Benefits in the U.S. LT4Gov@LREC (2020)
Denis R. Newman-Griffis, Ayah Zirikly, Pei-Shu Ho, Jonathan Camacho Maldonado, Maryanne Sacco, Alex Marr, Albert M. Lai, Eric Fosler-Lussier
Automated classification of mobility activities in free text clinical narratives. AMIA (2019)
Ayah Zirikly, Denis R. Newman-Griffis, Julia Porcino, Pei-Shu Ho, Jonathan Camacho Maldonado, Maryanne Sacco, Alex Marr
Bootstrapping a Mobility Dictionary from a Seed Set. AMIA (2019)
Denis Newman-Griffis, Ayah Zirikly, Guy Divita, Bart Desmet
Classifying the reported ability in clinical mobility descriptions. BioNLP@ACL (2019)
Denis Newman-Griffis, Ayah Zirikly, Guy Divita, Bart Desmet
Classifying the reported ability in clinical mobility descriptions. CoRR (2019)
Denis Newman-Griffis, Ayah Zirikly
Embedding Transfer for Low-Resource Medical Named Entity Recognition: A Case Study on Patient Mobility. CoRR (2018)
Denis Newman-Griffis, Ayah Zirikly
Embedding Transfer for Low-Resource Medical Named Entity Recognition: A Case Study on Patient Mobility. BioNLP (2018)
Han-Chin Shing, Suraj Nair, Ayah Zirikly, Meir Friedenberg, Hal Daumé III, Philip Resnik
Expert, Crowdsourced, and Machine Assessment of Suicide Risk via Online Postings. CLPsych@NAACL-HTL (2018)
Sean MacAvaney, Bart Desmet, Arman Cohan, Luca Soldaini, Andrew Yates, Ayah Zirikly, Nazli Goharian
RSDD-Time: Temporal Annotation of Self-Reported Mental Health Diagnoses. CoRR (2018)
Sean MacAvaney, Bart Desmet, Arman Cohan, Luca Soldaini, Andrew Yates, Ayah Zirikly, Nazli Goharian
RSDD-Time: Temporal Annotation of Self-Reported Mental Health Diagnoses. CLPsych@NAACL-HTL (2018)
Mohammed Attia, Ayah Zirikly, Mona T. Diab
The Power of Language Music: Arabic Lemmatization through Patterns. CogALex@COLING (2016)
Ayah Zirikly, Bart Desmet, Mona T. Diab
The GW/LT3 VarDial 2016 Shared Task System for Dialects and Similar Languages Detection. VarDial@COLING (2016)
Ayah Zirikly, Varun Kumar, Philip Resnik
The GW/UMD CLPsych 2016 Shared Task System. CLPsych@HLT-NAACL (2016)
Ayah Zirikly
Cross-lingual Transfer of Named Entity Recognizers without Parallel Corpora. ACL (2) (2015)
Ayah Zirikly, Mona T. Diab, Yassine Benajiba
GWU English TAC-KBP EL Diagnostic Task with Name Mention. TAC (2015)
Ayah Zirikly, Mona T. Diab
Named Entity Recognition for Arabic Social Media. VS@HLT-NAACL (2015)
Ayah Zirikly, Mona T. Diab
Named Entity Recognition System for Dialectal Arabic. ANLP@EMNLP (2014)
Ayah Zirikly, Mona T. Diab
ANEAR: Automatic Named Entity Aliasing Resolution. NLDB (2013)