Alexis Dereeper

Publication Activity (10 Years)

Years Active: 2007-2022
Publications (10 Years): 4

Top Topics

Visualization Tools

Comparative Genomics

Top Venues

Nucleic Acids Res.

Database J. Biol. Databases Curation

Publications

Alexis Dereeper, Marilyne Summo, Damien F. Meyer
PanExplorer: a web-based tool for exploratory analysis and visualization of bacterial pan-genomes. Bioinform. 38 (18) (2022)
Vincent Moco, Damien Cazenave, Maëlle Garnier, Matthieu Pot, Isabel Marcelino, Antoine Talarmin, Stéphanie Guyomard-Rabenirina, Sébastien Breurec, Séverine Ferdinand, Alexis Dereeper, Yann Reynaud, David Couvin
getSequenceInfo: a suite of tools allowing to get genome sequence information from public repositories. BMC Bioinform. 23 (1) (2022)
Alexis Dereeper, Stéphanie Bocs, Mathieu Rouard, Valentin Guignon, Sébastien Ravel, Christine Tranchant-Dubreuil, Valérie Poncet, Olivier Garsmeur, Philippe Lashermes, Gaëtan Droc
The coffee genome hub: a resource for coffee genomes. Nucleic Acids Res. 43 (Database-Issue) (2015)
Alexis Dereeper, Felix Homa, Gwendoline Andres, Guilhem Sempéré, Gautier Sarah, Yann Hueber, Jean-François Dufayard, Manuel Ruiz
SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations. Nucleic Acids Res. 43 (Webserver-Issue) (2015)
Gaëtan Droc, Delphine Larivière, Valentin Guignon, Nabila Yahiaoui, Dominique This, Olivier Garsmeur, Alexis Dereeper, Chantal Hamelin, Xavier Argout, Jean-François Dufayard, Juliette Lengelle, Franc-Christophe Baurens, Alberto Cenci, Bertrand Pitollat, Angélique D'Hont, Manuel Ruiz, Mathieu Rouard, Stéphanie Bocs
The Banana Genome Hub. Database J. Biol. Databases Curation 2013 (2013)
Alexis Dereeper, Stéphane Nicolas, Loic Le Cunff, Roberto Bacilieri, Agnes Doligez, Jean-Pierre Peros, Manuel Ruiz, Patrice This
SNiPlay: a web-based tool for detection, management and analysis of SNPs. Application to grapevine diversity projects. BMC Bioinform. 12 (2011)
Alexis Dereeper, Valentin Guignon, Guillaume Blanc, Stéphane Audic, S. Buffet, François Chevenet, Jean-François Dufayard, Stéphane Guindon, Vincent Lefort, Magali Lescot, Jean-Michel Claverie, Olivier Gascuel
Phylogeny.fr: robust phylogenetic analysis for the non-specialist. Nucleic Acids Res. 36 (Web-Server-Issue) (2008)
Alexis Dereeper, Xavier Argout, Claire Billot, Jean-François Rami, Manuel Ruiz
SAT, a flexible and optimized Web application for SSR marker development. BMC Bioinform. 8 (2007)