Alexander T. Pearson

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 9

Top Topics

Mathematical Models

Weakly Supervised

Top Venues

PLoS Comput. Biol.

Comput. Biol. Medicine

Publications

James M. Dolezal, Sara Kochanny, Emma C. Dyer, Siddhi Ramesh, Andrew Srisuwananukorn, Matteo Sacco, Frederick M. Howard, Anran Li, Prajval Mohan, Alexander T. Pearson
Slideflow: deep learning for digital histopathology with real-time whole-slide visualization. BMC Bioinform. 25 (1) (2024)
Jan Moritz Niehues, Gustav Müller-Franzes, Yoni Schirris, Sophia J. Wagner, Michael Jendrusch, Matthias Kloor, Alexander T. Pearson, Hannah Sophie Muti, Katherine Jane Hewitt, Gregory Patrick Veldhuizen, Laura Zigutyte, Daniel Truhn, Jakob Nikolas Kather
Using histopathology latent diffusion models as privacy-preserving dataset augmenters improves downstream classification performance. Comput. Biol. Medicine 175 (2024)
James M. Dolezal, Sara Kochanny, Emma Dyer, Andrew Srisuwananukorn, Matteo Sacco, Frederick M. Howard, Anran Li, Prajval Mohan, Alexander T. Pearson
Slideflow: Deep Learning for Digital Histopathology with Real-Time Whole-Slide Visualization. CoRR (2023)
Catherine A. Gao, Frederick M. Howard, Nikolay S. Markov, Emma C. Dyer, Siddhi Ramesh, Yuan Luo, Alexander T. Pearson
Comparing scientific abstracts generated by ChatGPT to real abstracts with detectors and blinded human reviewers. npj Digit. Medicine 6 (2023)
James M. Dolezal, Rachelle Wolk, Hanna M. Hieromnimon, Frederick M. Howard, Andrew Srisuwananukorn, Dmitry Karpeyev, Siddhi Ramesh, Sara Kochanny, Jung Woo Kwon, Meghana Agni, Richard C. Simon, Chandni Desai, Raghad Kherallah, Tung D. Nguyen, Jefree J. Schulte, Kimberly Cole, Galina Khramtsova, Marina Chiara Garassino, Aliya N. Husain, Huihua Li, Robert Grossman, Nicole A. Cipriani, Alexander T. Pearson
Deep Learning Generates Synthetic Cancer Histology for Explainability and Education. CoRR (2022)
James M. Dolezal, Andrew Srisuwananukorn, Dmitry Karpeyev, Siddhi Ramesh, Sara Kochanny, Brittany Cody, Aaron Mansfield, Sagar Rakshit, Radhika Bansa, Melanie Bois, Aaron O. Bungum, Jefree J. Schulte, Everett E. Vokes, Marina Chiara Garassino, Aliya N. Husain, Alexander T. Pearson
Uncertainty-Informed Deep Learning Models Enable High-Confidence Predictions for Digital Histopathology. CoRR (2022)
Narmin Ghaffari Laleh, Chiara Maria Lavinia Loeffler, Julia Grajek, Katerina Stanková, Alexander T. Pearson, Hannah Sophie Muti, Christian Trautwein, Heiko Enderling, Jan Poleszczuk, Jakob Nikolas Kather
Classical mathematical models for prediction of response to chemotherapy and immunotherapy. PLoS Comput. Biol. 18 (2) (2022)
Vladimir Naumov, Evgeny Putin, Stefan Pushkov, Ekaterina Kozlova, Konstantin Romantsov, Alexander A. Kalashnikov, Fedor Galkin, Nina Tihonova, Anastasia Shneyderman, Egor Galkin, Arsenii Zinkevich, Stephanie M. Cope, Ramanathan Sethuraman, Tudor I. Oprea, Alexander T. Pearson, Savas Tay, Nishant Agrawal, Alexey Dubovenko, Quentin Vanhaelen, Ivan Ozerov, Alex Aliper, Evgeny Izumchenko, Alex Zhavoronkov
COVIDomic: A multi-modal cloud-based platform for identification of risk factors associated with COVID-19 severity. PLoS Comput. Biol. 17 (7) (2021)
Fereshteh Nazari, Alexander T. Pearson, Jacques Eduardo Nör, Trachette L. Jackson
A mathematical model for IL-6-mediated, stem cell driven tumor growth and targeted treatment. PLoS Comput. Biol. 14 (1) (2018)