Alessandro Paiardini

Publication Activity (10 Years)

Years Active: 2005-2023
Publications (10 Years): 6

Top Topics

Spatial Distribution

Train A Neural Network

Protein Homology

Top Venues

PLoS Comput. Biol.

Publications

Francesco Di Luzio, Alessandro Paiardini, Federica Colonnese, Antonello Rosato, Massimo Panella
A Deep Neural Network for G-Quadruplexes Binding Proteins Classification. IWANN (1) (2023)
Serena Rosignoli, Luisa di Paola, Alessandro Paiardini
PyPCN: protein contact networks in PyMOL. Bioinform. 39 (10) (2023)
Serena Rosignoli, Alessandro Paiardini
DockingPie: a consensus docking plugin for PyMOL. Bioinform. 38 (17) (2022)
Giacomo Janson, Alessandro Paiardini
PyMod 3: a complete suite for structural bioinformatics in PyMOL. Bioinform. 37 (10) (2021)
Giacomo Janson, Alessandro Grottesi, Marco Pietrosanto, Gabriele Ausiello, Giulia Guarguaglini, Alessandro Paiardini
Revisiting the "satisfaction of spatial restraints" approach of MODELLER for protein homology modeling. PLoS Comput. Biol. 15 (12) (2019)
Giacomo Janson, Chengxin Zhang, Maria Giulia Prado, Alessandro Paiardini
PyMod 2.0: improvements in protein sequence-structure analysis and homology modeling within PyMOL. Bioinform. 33 (3) (2017)
Emanuele Bramucci, Alessandro Paiardini, Francesco Bossa, Stefano Pascarella
PyMod: sequence similarity searches, multiple sequence-structure alignments, and homology modeling within PyMOL. BMC Bioinform. 13 (S-4) (2012)
Alessandro Paiardini, Francesco Bossa, Stefano Pascarella
CAMPO, SCR_FIND and CHC_FIND: a suite of web tools for computational structural biology. Nucleic Acids Res. 33 (Web-Server-Issue) (2005)