Alberto Santamaría-Pang

Publication Activity (10 Years)

Years Active: 2004-2024
Publications (10 Years): 28

Top Topics

Fluorescence Microscopy

Semantic Segmentation

Medical Image Retrieval

Top Venues

Medical Imaging: Digital Pathology

Publications

Ho Hin Lee, Yu Gu, Theodore Zhao, Yanbo Xu, Jianwei Yang, Naoto Usuyama, Cliff Wong, Mu Wei, Bennett A. Landman, Yuankai Huo, Alberto Santamaría-Pang, Hoifung Poon
Foundation Models for Biomedical Image Segmentation: A Survey. CoRR (2024)
Ammar Ahmed Pallikonda Latheef, Alberto Santamaría-Pang, Craig K. Jones, Haris I. Sair
Emergent Language Symbolic Autoencoder (ELSA) with Weak Supervision to Model Hierarchical Brain Networks. CoRR (2024)
Hrishikesh Kambli, Alberto Santamaría-Pang, Ivan Tarapov, Elham Beheshtian, Licia P. Luna, Haris I. Sair, Craig K. Jones
Atlas-Based Labeling of Resting-State fMRI. Brain Connect. 14 (6) (2024)
Ho Hin Lee, Alberto Santamaría-Pang, Jameson Merkow, Ozan Oktay, Fernando Pérez-García, Javier Alvarez-Valle, Ivan Tarapov
Region-based Contrastive Pretraining for Medical Image Retrieval with Anatomic Query. CoRR (2023)
Asma Ben Abacha, Alberto Santamaría-Pang, Ho Hin Lee, Jameson Merkow, Qin Cai, Surya Teja Devarakonda, Abdullah Islam, Julia Gong, Matthew P. Lungren, Thomas Lin, Noel C. Codella, Ivan Tarapov
3D-MIR: A Benchmark and Empirical Study on 3D Medical Image Retrieval in Radiology. CoRR (2023)
Ammar Ahmed Pallikonda Latheef, Sejal Ghate, Zhipeng Hui, Alberto Santamaría-Pang, Ivan Tarapov, Haris I. Sair, Craig K. Jones
Deep Labeling of fMRI Brain Networks. CoRR (2023)
Sejal Ghate, Alberto Santamaría-Pang, Ivan Tarapov, Haris I. Sair, Craig K. Jones
Deep Labeling of fMRI Brain Networks Using Cloud Based Processing. ISVC (1) (2022)
Sejal Ghate, Alberto Santamaría-Pang, Ivan Tarapov, Haris I. Sair, Craig K. Jones
Deep Labeling of fMRI Brain Networks Using Cloud Based Processing. CoRR (2022)
Alberto Santamaría-Pang, Jianwei Qiu, Aritra Chowdhury, James Kubricht, Peter H. Tu, Naresh Iyer, Nurali Virani
Adversarial Attacks with Time-Scale Representations. CoRR (2021)
Aritra Chowdhury, Alberto Santamaría-Pang, James R. Kubricht, Peter H. Tu
Emergent Symbolic Language Based Deep Medical Image Classification. ISBI (2021)
Alberto Santamaría-Pang, James Kubricht, Aritra Chowdhury, Chitresh Bhushan, Peter H. Tu
Towards Emergent Language Symbolic Semantic Segmentation and Model Interpretability. MICCAI (1) (2020)
Aritra Chowdhury, Alberto Santamaría-Pang, James R. Kubricht, Jianwei Qiu, Peter H. Tu
Symbolic Semantic Segmentation and Interpretation of COVID-19 Lung Infections in Chest CT volumes based on Emergent Languages. CoRR (2020)
Aritra Chowdhury, James R. Kubricht, Anup Sood, Peter H. Tu, Alberto Santamaría-Pang
ESCELL: Emergent Symbolic Cellular Language. CoRR (2020)
Aritra Chowdhury, James R. Kubricht, Anup Sood, Peter H. Tu, Alberto Santamaría-Pang
Escell: Emergent Symbolic Cellular Language. ISBI (2020)
Alberto Santamaría-Pang, James Kubricht, Aritra Chowdhury, Chitresh Bhushan, Peter H. Tu
Towards Emergent Language Symbolic Semantic Segmentation and Model Interpretability. CoRR (2020)
Alberto Santamaría-Pang, Anup Sood, Dan E. Meyer, Aritra Chowdhury, Fiona Ginty
Automated Phenotyping via Cell Auto Training (CAT) on the Cell DIVE Platform. CoRR (2020)
Aritra Chowdhury, Alberto Santamaría-Pang, James R. Kubricht, Peter H. Tu
Emergent symbolic language based deep medical image classification. CoRR (2020)
Chinmaya Devaraj, Aritra Chowdhury, Arpit Jain, James R. Kubricht, Peter H. Tu, Alberto Santamaría-Pang
From Symbols to Signals: Symbolic Variational Autoencoders. ICASSP (2020)
James R. Kubricht, Alberto Santamaría-Pang, Chinmaya Devaraj, Aritra Chowdhury, Peter H. Tu
Emergent Languages from Pretrained Embeddings Characterize Latent Concepts in Dynamic Imagery. Int. J. Semantic Comput. 14 (3) (2020)
Peter H. Tu, Donald Hamilton, Tao Gao, Alex Chen, Justin Foehner, Alberto Santamaría-Pang, James Kubricht
A Learning Approach to Interactive Advertising. AVSS (2019)
Alberto Santamaría-Pang, Anup Sood, Dan E. Meyer, Aritra Chowdhury, Fiona Ginty
Automated Phenotyping via Cell Auto Training (CAT) on the Cell DIVE Platform. BIBM (2019)
Alberto Santamaría-Pang, James R. Kubricht, Chinmaya Devaraj, Aritra Chowdhury, Peter H. Tu
Towards Semantic Action Analysis via Emergent Language. AIVR (2019)
Aritra Chowdhury, Dmitry V. Dylov, Qing Li, Michael MacDonald, Dan E. Meyer, Michael Marino, Alberto Santamaría-Pang
Blood vessel characterization using virtual 3D models and convolutional neural networks in fluorescence microscopy. ISBI (2017)
Aritra Chowdhury, Christopher J. Sevinsky, Alberto Santamaría-Pang, Bülent Yener
A computational study on convolutional feature combination strategies for grade classification in colon cancer using fluorescence microscopy data. Medical Imaging: Digital Pathology (2017)
Alberto Santamaría-Pang, Raghav K. Padmanabhan, Anup Sood, Michael J. Gerdes, Christopher Sevinsky, Qing Li, Nicole LaPlante, Fiona Ginty
Robust single cell quantification of immune cell subtypes in histological samples. BHI (2017)
Yousef Al-Kofahi, Christopher Sevinsky, Alberto Santamaría-Pang, Fiona Ginty, Anup Sood, Qing Li
Multi-channel algorithm for segmentation of tumor blood vessels using multiplexed image data. ISBI (2016)
Alberto Santamaría-Pang, Paul Hernandez-Herrera, Manos Papadakis, Peter Saggau, Ioannis A. Kakadiaris
Automatic Morphological Reconstruction of Neurons from Multiphoton and Confocal Microscopy Images Using 3D Tubular Models. Neuroinformatics 13 (3) (2015)
Alberto Santamaría-Pang, Jens Rittscher, Michael J. Gerdes, Dirk R. Padfield
Cell segmentation and classification by hierarchical supervised shape ranking. ISBI (2015)
Jens Rittscher, Alberto Santamaría-Pang
Mapping for tissue based cytometry. ISBI (2014)
Alberto Santamaría-Pang, Yuchi Huang, Jens Rittscher
Cell segmentation and classification via unsupervised shape ranking. ISBI (2013)
Michael J. Gerdes, Christopher J. Sevinsky, Anup Sood, Sudeshna Adak, Musodiq O. Bello, Alexander Bordwell, Ali Can, Alex Corwin, Sean Dinn, Robert Filkins, Denise Hollman, Vidya Kamath, Sireesha Kaanumalle, Kevin B. Kenny, Melinda Larsen, Michael Lazare, Qing Li, Christina Lowes, Colin C. McCulloch, Elizabeth McDonough, Michael Montalto, Zhengyu Pang, Jens Rittscher, Alberto Santamaría-Pang, Brion D. Sarachan, Maximilian L. Seel, Antti Seppo, Kashan Shaikh, Yunxia Sui, Jingyu Zhang, Fiona Ginty
Highly multiplexed single-cell analysis of formalin-fixed, paraffin-embedded cancer tissue. Proc. Natl. Acad. Sci. USA 110 (29) (2013)
Daniel Margolis, Alberto Santamaría-Pang, Jens Rittscher
Tissue segmentation and classification using graph-based unsupervised clustering. ISBI (2012)
Ioannis A. Kakadiaris, Alberto Santamaría-Pang, Amol Pednekar
Functional Morphology Analysis of the Left Anterior Descending Coronary Artery in EBCT Images. IEEE Trans. Biomed. Eng. 57 (8) (2010)
Alberto Santamaría-Pang, Sandeep Dutta, Sokratis Makrogiannis, Amy K. Hara, William Pavlicek, Alvin C. Silva, Brian Thomsen, Scott Robertson, Darin Okerlund, David A. Langan, Rahul Bhotika
Automated liver lesion characterization using fast kVp switching dual energy computed tomography imaging. Medical Imaging: Computer-Aided Diagnosis (2010)
Alberto Santamaría-Pang, Teodor Stefan Bildea, Tan Shan, Ioannis A. Kakadiaris
Denoising for 3-D Photon-Limited Imaging Data Using Nonseparable Filterbanks. IEEE Trans. Image Process. 17 (12) (2008)
Alberto Santamaría-Pang, Costa M. Colbert, Peter Saggau, Ioannis A. Kakadiaris
Automatic Centerline Extraction of Irregular Tubular Structures Using Probability Volumes from Multiphoton Imaging. MICCAI (2) (2007)
S. Urban, Sean M. O'Malley, B. Walsh, Alberto Santamaría-Pang, Peter Saggau, Costa M. Colbert, Ioannis A. Kakadiaris
Automatic Reconstruction of Dendrite Morphology from Optical Section Stacks. CVAMIA (2006)
Alberto Santamaría-Pang, Teodor Stefan Bildea, Ioannis Konstantinidis, Ioannis A. Kakadiaris
Adaptive Frames-Based Denoising of Confocal Microscopy Data. ICASSP (2) (2006)
Ioannis A. Kakadiaris, Amol Pednekar, Alberto Santamaría-Pang
Three-Dimensional Shape-Motion Analysis of the Left Anterior Descending Coronary Artery in EBCT Images. MICCAI (2) (2004)