Agnieszka Danek

Publication Activity (10 Years)

Years Active: 2010-2023
Publications (10 Years): 6

Top Topics

Distance Estimation

Structured Representation

Collection Selection

Geometric Hashing

Top Venues

Publications

Sebastian Deorowicz, Agnieszka Danek, Heng Li
AGC: compact representation of assembled genomes with fast queries and updates. Bioinform. 39 (3) (2023)
Sebastian Deorowicz, Agnieszka Danek, Marek Kokot
VCFShark: how to squeeze a VCF file. Bioinform. 37 (19) (2021)
Sebastian Deorowicz, Adam Gudys, Maciej Dlugosz, Marek Kokot, Agnieszka Danek
Kmer-db: instant evolutionary distance estimation. Bioinform. 35 (1) (2019)
Sebastian Deorowicz, Agnieszka Danek
GTShark: genotype compression in large projects. Bioinform. 35 (22) (2019)
Agnieszka Danek, Sebastian Deorowicz
GTC: how to maintain huge genotype collections in a compressed form. Bioinform. 34 (11) (2018)
Sebastian Deorowicz, Agnieszka Danek, Marcin Niemiec
GDC 2: Compression of large collections of genomes. CoRR (2015)
Agnieszka Danek, Sebastian Deorowicz, Szymon Grabowski
Indexing large genome collections on a PC. CoRR (2014)
Sebastian Deorowicz, Agnieszka Danek, Szymon Grabowski
Genome compression: a novel approach for large collections. Bioinform. 29 (20) (2013)
Agnieszka Danek, Sebastian Deorowicz
Bit-Parallel Algorithm for the Block Variant of the Merged Longest Common Subsequence Problem. ICMMI (2013)
Sebastian Deorowicz, Agnieszka Danek
Bit-Parallel Algorithms for the Merged Longest Common Subsequence Problem. Int. J. Found. Comput. Sci. 24 (8) (2013)
Agnieszka Danek, Rafal Pokrzywa, Izabela Makalowska, Andrzej Polanski
Application of the Burrows-Wheeler Transform for Searching for Approximate Tandem Repeats. PRIB (2012)
Agnieszka Danek, Joana Urbano, Ana Paula Rocha, Eugénio C. Oliveira
Engaging the Dynamics of Trust in Computational Trust and Reputation Systems. KES-AMSTA (1) (2010)