Abbas Shirinifard

Publication Activity (10 Years)

Years Active: 2008-2024
Publications (10 Years): 5

Top Topics

Animal Behavior

Weighted Averaging

Top Venues

Publications

Amirkoushyar Ziabari, Derek C. Rose, Abbas Shirinifard, David J. Solecki
YOLO2U-Net: Detection-guided 3D instance segmentation for microscopy. Pattern Recognit. Lett. 181 (2024)
Benjamin Lansdell, Abbas Shirinifard
Ethome: tools for machine learning of animal behavior. J. Open Source Softw. 9 (96) (2024)
Amirkoushyar Ziabari, Derek C. Rose, Abbas Shirinifard, David J. Solecki
YOLO2U-Net: Detection-Guided 3D Instance Segmentation for Microscopy. CoRR (2022)
Amirkoushyar Ziabari, Derek C. Rose, Matthew R. Eicholtz, David J. Solecki, Abbas Shirinifard
A 2.5d Yolo-Based Fusion Algorithm for 3d Localization Of Cells. ACSSC (2019)
Amirkoushyar Ziabari, Abbas Shirinifard, Matthew R. Eicholtz, David J. Solecki, Derek C. Rose
A Two-Tier Convolutional Neural Network for Combined Detection and Segmentation in Biological Imagery. GlobalSIP (2019)
James P. Sluka, Abbas Shirinifard, Maciej Swat, Alin Cosmanescu, Randy W. Heiland, James A. Glazier
The cell behavior ontology: describing the intrinsic biological behaviors of real and model cells seen as active agents. Bioinform. 30 (16) (2014)
Abbas Shirinifard, James A. Glazier, Maciej Swat, J. Scott Gens, Fereydoon Family, Yi Jiang, Hans E. Grossniklaus
Adhesion Failures Determine the Pattern of Choroidal Neovascularization in the Eye: A Computer Simulation Study. PLoS Comput. Biol. 8 (5) (2012)
Randy W. Heiland, Abbas Shirinifard, Maciej Swat, Gilberto L. Thomas, James P. Sluka, Andrew Lumsdaine, Benjamin Zaitlen, James A. Glazier
Visualizing cells and their connectivity graphs for CompuCell3D. BioVis (2012)
Roeland Merks, Erica D. Perryn, Abbas Shirinifard, James A. Glazier
Contact-Inhibited Chemotaxis in De Novo and Sprouting Blood-Vessel Growth. PLoS Comput. Biol. 4 (9) (2008)